Lecture Notes of "Algorithms in Bio-informatics (CS60043)"

1	Syllebus	A brief outline of the course and text books.
2	Cells	An overview of different functions of a cell.
3	Chemical Foundations	Introduction different types of chemical bonds.
4	Bio-molecules	Carbohydrates, Lipids, Proteins and Nucleic Acids.
4a	Secondary Structure Prediction	Chow-Fasman Algorithm.
5	Gene Expression	Gene Expression and Genome Anatomy.
5a	Biological Words	Statistically significant sequences.
5b	Motif Finding	Motif Finding
6	DNA Editing.	Different Operations with DNA sequences.
7	DNA Labelling	Marking DNA sequences.
8	Genome Mapping	Mapping Genomes and sequencing DNAs.
9	Gene Linkage.	Gene Linkage.
10	Resources	Databases for different sequences.
11	Sequence Allignment	Sequence Allignment: Global, Local and Heuristic Searches.
12	Gene Prediction	Gene Prediction.
13	Fragment Assembly	Fragment Assembly.
14	Expression Analysis	Gene Expression Analysis.
15	Evolutionary Trees	Evolutionary Trees.
16	List of Assignments.	List of Assignments: A few examples.